Genome Meta Information: Streptococcus mitis O4-1 (GCA_023110415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023110415.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis O4-1 | ||
| Strain or Isolate | O4-1 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis |
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| Sequencing Technology | Illumina NextSeq 500 | ||
| Genome Coverage | 194.0x | ||
| Contigs |
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| Total Sequence Length | 1,871,204 (bp) | ||
| GC Percentage | 40.38 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/110/415/GCA_023110415.1_ASM2311041v1 | ||
| CDS | 1756 | ||
| Genes | 1851 | ||
| mRNA | 1851 | ||
| misc RNA | 48 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.36 % | ||
| CheckM Completeness | 99.78 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 99.98 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2311041v1 |
| GenBank Assembly Accession | GCA_023110415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023110415.1 [NCBI] |
| BioSample | SAMN26876537 [NCBI] |
| BioProject | PRJNA817585 [NCBI] |
| Submitter | The University of Texas at Dallas |
| Submission Date | 2022-03-22T18:07:04.753 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JALDWA01 |
| NCBI TaxID | 28037 |
| Isolation Source | Oral |
| Geo Location | USA: Texas |
