Genome Meta Information: Staphylococcus hominis WiKim0113 (GCA_023277465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023277465.1 | ||
| HOMD Taxon-ID | HMT-0127 | ||
| Species Name (in use by HOMD) | Staphylococcus hominis | ||
| Organism Name (as deposited) | HMT-127 Staphylococcus hominis WiKim0113 | ||
| Strain or Isolate | WiKim0113 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus hominis |
||
| Sequencing Technology | PacBio RSII | ||
| Genome Coverage | 347.47 | ||
| Contigs |
|
||
| Total Sequence Length | 2,239,213 (bp) | ||
| GC Percentage | 31.53 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/277/465/GCA_023277465.1_ASM2327746v1 | ||
| CDS | 2116 | ||
| Genes | 2266 | ||
| mRNA | 2266 | ||
| misc RNA | 68 | ||
| rRNA | 19 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.16 % | ||
| CheckM Completeness | 91.49 % | ||
| CheckM Contamination | 3.61 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2327746v1 |
| GenBank Assembly Accession | GCA_023277465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023277465.1 [NCBI] |
| BioSample | SAMN20499013 [NCBI] |
| BioProject | PRJNA750864 [NCBI] |
| Submitter | World Institute of Kimchi |
| Submission Date | 2021-07-30T01:17:07.690 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 145391 |
| Isolation Source | kimchi |
| Geo Location | South Korea |
