Genome Meta Information: Enterococcus faecalis AT48 (GCA_023299425.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023299425.1 | ||
| HOMD Taxon-ID | HMT-0604 | ||
| Species Name (in use by HOMD) | Enterococcus faecalis | ||
| Organism Name (as deposited) | HMT-604 Enterococcus faecalis AT48 | ||
| Strain or Isolate | AT48 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus; s__Enterococcus faecalis |
||
| Sequencing Technology | Illumina MiniSeq, Oxford Nanopore | ||
| Genome Coverage | |||
| Contigs |
|
||
| Total Sequence Length | 2,924,329 (bp) | ||
| GC Percentage | 37.5 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/299/425/GCA_023299425.1_ASM2329942v1 | ||
| CDS | 2757 | ||
| Genes | 2912 | ||
| mRNA | 2912 | ||
| misc RNA | 82 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.92 % | ||
| CheckM Completeness | 99.5 % | ||
| CheckM Contamination | 1.12 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2329942v1 |
| GenBank Assembly Accession | GCA_023299425.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023299425.1 [NCBI] |
| BioSample | SAMN28025466 [NCBI] |
| BioProject | PRJNA833940 [NCBI] |
| Submitter | University of Zurich |
| Submission Date | 2022-05-02T08:20:04.860 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1351 |
| Isolation Source | pet food (BARF) |
| Geo Location | not applicable |
