Genome Meta Information: Enterococcus durans S8-3 (GCA_023375285.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023375285.1 | ||
| HOMD Taxon-ID | HMT-0880 | ||
| Species Name (in use by HOMD) | Enterococcus durans | ||
| Organism Name (as deposited) | HMT-880 Enterococcus durans S8-3 | ||
| Strain or Isolate | S8-3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B; s__Enterococcus_B durans |
||
| Sequencing Technology | Illumina MiniSeq, Oxford Nanopore Minion | ||
| Genome Coverage | 95185 | ||
| Contigs |
|
||
| Total Sequence Length | 3,046,846 (bp) | ||
| GC Percentage | 37.92 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/375/285/GCA_023375285.1_ASM2337528v1 | ||
| CDS | 2755 | ||
| Genes | 2909 | ||
| mRNA | 2909 | ||
| misc RNA | 68 | ||
| rRNA | 18 | ||
| tRNA | 67 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.46 % | ||
| CheckM Completeness | 98.46 % | ||
| CheckM Contamination | 0.17 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2337528v1 |
| GenBank Assembly Accession | GCA_023375285.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023375285.1 [NCBI] |
| BioSample | SAMN23424483 [NCBI] |
| BioProject | PRJNA774104 [NCBI] |
| Submitter | University of Zurich |
| Submission Date | 2021-11-24T10:43:03.956 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 53345 |
| Isolation Source | fecal sample |
| Geo Location | not applicable |
