Taxon Table | Genome Table
Genome Meta Information:
Fusobacterium
animalis
YWH7056 (GCA_023383605.1)
| HOMD Genome-ID |
GCA_023383605.1
|
| HOMD Taxon-ID |
HMT-0420
|
| Species Name (in use by HOMD) |
Fusobacterium animalis
|
| Organism Name (as deposited) |
HMT-420 Fusobacterium animalis YWH7056
|
| Strain or Isolate |
YWH7056
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;
s__Fusobacterium animalis |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
210.04
|
| Contigs |
Number of Contigs: 279
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,311,780 (bp) |
| GC Percentage |
26.79
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/383/605/GCA_023383605.1_ASM2338360v1
|
| CDS |
2160
|
| Genes |
2220
|
| mRNA |
2220
|
| misc RNA |
18
|
| rRNA |
2
|
| tRNA |
39
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
91.83 %
|
| CheckM Completeness |
96.73 %
|
| CheckM Contamination |
0.78 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2338360v1
|
| GenBank Assembly Accession |
GCA_023383605.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_023383605.1
[NCBI]
|
| BioSample |
SAMN07819094
[NCBI]
|
| BioProject |
PRJNA219460
[NCBI]
|
| Submitter |
Han laboratory, Department of Periodontics, Case Western Reserve University
|
| Submission Date |
2017-10-20T18:41:04.940
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
AYHC01
|
| NCBI TaxID |
1402205
|
| Isolation Source |
placenta
|
| Geo Location |
USA: OH
|
