Genome Meta Information: Enterococcus italicus DRD-111 (GCA_023743875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_023743875.1 | ||
| HOMD Taxon-ID | HMT-0803 | ||
| Species Name (in use by HOMD) | Enterococcus italicus | ||
| Organism Name (as deposited) | HMT-803 Enterococcus italicus DRD-111 | ||
| Strain or Isolate | DRD-111 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_G; s__Enterococcus_G italicus |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 333 | ||
| Contigs |
|
||
| Total Sequence Length | 2,334,547 (bp) | ||
| GC Percentage | 39.35 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/743/875/GCA_023743875.1_ASM2374387v1 | ||
| CDS | 2240 | ||
| Genes | 2335 | ||
| mRNA | 2335 | ||
| misc RNA | 54 | ||
| rRNA | 2 | ||
| tRNA | 38 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.71 % | ||
| CheckM Completeness | 97.45 % | ||
| CheckM Contamination | 2.01 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2374387v1 |
| GenBank Assembly Accession | GCA_023743875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_023743875.1 [NCBI] |
| BioSample | SAMN28911231 [NCBI] |
| BioProject | PRJNA847029 [NCBI] |
| Submitter | Hellenic Agricultural Organization - DIMITRA |
| Submission Date | 2022-06-08T06:38:05.990 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAMRVB01 |
| NCBI TaxID | 246144 |
| Isolation Source | raw sheep milk |
| Geo Location | Greece: Epirus |
