Genome Meta Information: Corynebacterium aurimucosum DSM 44532 (GCA_024138775.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024138775.1 | ||
| HOMD Taxon-ID | HMT-0034 | ||
| Species Name (in use by HOMD) | Corynebacterium aurimucosum | ||
| Organism Name (as deposited) | HMT-034 Corynebacterium aurimucosum clade-034 DSM 44532 | ||
| Strain or Isolate | DSM 44532 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium aurimucosum |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 68 | ||
| Contigs |
|
||
| Total Sequence Length | 2,683,765 (bp) | ||
| GC Percentage | 60.54 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/138/775/GCA_024138775.1_ASM2413877v1 | ||
| CDS | 2494 | ||
| Genes | 2560 | ||
| mRNA | 2560 | ||
| misc RNA | 7 | ||
| rRNA | 6 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 89.04 % | ||
| CheckM Contamination | 4.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2413877v1 |
| GenBank Assembly Accession | GCA_024138775.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024138775.1 [NCBI] |
| BioSample | SAMN18253773 [NCBI] |
| BioProject | PRJNA713536 [NCBI] |
| Submitter | Northumbria University |
| Submission Date | 2021-03-11T05:19:07.207 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 169292 |
| Isolation Source | Blood culture |
| Geo Location | Germany |
