Genome Meta Information: Cutibacterium modestum 31N (GCA_024172855.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024172855.1 | ||
| HOMD Taxon-ID | HMT-0193 | ||
| Species Name (in use by HOMD) | Cutibacterium modestum | ||
| Organism Name (as deposited) | HMT-193 Cutibacterium modestum 31N | ||
| Strain or Isolate | 31N | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium modestum |
||
| Sequencing Technology | Illumina; 454 | ||
| Genome Coverage | 605 | ||
| Contigs |
|
||
| Total Sequence Length | 2,609,057 (bp) | ||
| GC Percentage | 59.89 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/172/855/GCA_024172855.1_ASM2417285v1 | ||
| CDS | 2551 | ||
| Genes | 2626 | ||
| mRNA | 2626 | ||
| misc RNA | 24 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.72 % | ||
| CheckM Completeness | 97.62 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2417285v1 |
| GenBank Assembly Accession | GCA_024172855.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024172855.1 [NCBI] |
| BioSample | SAMN29439309 [NCBI] |
| BioProject | PRJNA162705 [NCBI] |
| Submitter | Bumgarner laboratory, Department of Microbiology, University of Washington |
| Submission Date | 2022-06-30T10:20:07.523 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | ALWN01 |
| NCBI TaxID | 1182755 |
| Isolation Source | glenoid membrane from a patient with failed shoulder athroplasty |
| Geo Location | USA: WA |
