Genome Meta Information: Streptococcus parasanguinis CF10-6 (GCA_024295785.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024295785.1 | ||
| HOMD Taxon-ID | HMT-0411 | ||
| Species Name (in use by HOMD) | Streptococcus parasanguinis | ||
| Organism Name (as deposited) | HMT-411 Streptococcus parasanguinis CF10-6 | ||
| Strain or Isolate | CF10-6 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus parasanguinis_I |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,293,977 (bp) | ||
| GC Percentage | 41.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/295/785/GCA_024295785.1_ASM2429578v1 | ||
| CDS | 2216 | ||
| Genes | 2300 | ||
| mRNA | 2300 | ||
| misc RNA | 41 | ||
| rRNA | 3 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.15 % | ||
| CheckM Completeness | 98.48 % | ||
| CheckM Contamination | 4.99 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2429578v1 |
| GenBank Assembly Accession | GCA_024295785.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024295785.1 [NCBI] |
| BioSample | SAMN29500118 [NCBI] |
| BioProject | PRJNA855844 [NCBI] |
| Submitter | Xian Jiaotong-Liverpool University |
| Submission Date | 2022-07-05T10:24:04.883 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JANCPP01 |
| NCBI TaxID | 1318 |
| Isolation Source | |
| Geo Location | United Kingdom: Liverpool |
