Genome Meta Information: Streptococcus constellatus TCV107 (GCA_024399395.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024399395.1 | ||
| HOMD Taxon-ID | HMT-0576 | ||
| Species Name (in use by HOMD) | Streptococcus constellatus | ||
| Organism Name (as deposited) | HMT-576 Streptococcus constellatus TCV107 | ||
| Strain or Isolate | TCV107 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus constellatus |
||
| Sequencing Technology | Oxford Nanopore | ||
| Genome Coverage | 125 | ||
| Contigs |
|
||
| Total Sequence Length | 1,980,997 (bp) | ||
| GC Percentage | 38.11 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/399/395/GCA_024399395.1_ASM2439939v1 | ||
| CDS | 1939 | ||
| Genes | 2042 | ||
| mRNA | 2042 | ||
| misc RNA | 31 | ||
| rRNA | 12 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.67 % | ||
| CheckM Completeness | 97.58 % | ||
| CheckM Contamination | 0.51 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2439939v1 |
| GenBank Assembly Accession | GCA_024399395.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_024399395.1 [NCBI] |
| BioSample | SAMN09005831 [NCBI] |
| BioProject | PRJNA454548 [NCBI] |
| Submitter | National Chung Cheng University |
| Submission Date | 2018-05-01T08:26:08.473 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 76860 |
| Isolation Source | Abscess |
| Geo Location | Taiwan |
