Taxon Table | Genome Table
Genome Meta Information:
Veillonella
parvula
DFI.7.86 (GCA_024461815.1)
| HOMD Genome-ID |
GCA_024461815.1
|
| HOMD Taxon-ID |
HMT-0161
|
| Species Name (in use by HOMD) |
Veillonella parvula
|
| Organism Name (as deposited) |
HMT-161 Veillonella parvula DFI.7.86
|
| Strain or Isolate |
DFI.7.86
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella;
s__Veillonella parvula_E |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
100
|
| Contigs |
Number of Contigs: 191
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,139,010 (bp) |
| GC Percentage |
38.69
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/461/815/GCA_024461815.1_ASM2446181v1
|
| CDS |
1869
|
| Genes |
1932
|
| mRNA |
1932
|
| misc RNA |
21
|
| rRNA |
6
|
| tRNA |
35
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
96.77 %
|
| CheckM Completeness |
95.18 %
|
| CheckM Contamination |
2.73 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2446181v1
|
| GenBank Assembly Accession |
GCA_024461815.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_024461815.1
[NCBI]
|
| BioSample |
SAMN28944564
[NCBI]
|
| BioProject |
PRJNA792599
[NCBI]
|
| Submitter |
University of Chicago
|
| Submission Date |
2022-06-09T14:20:07.173
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JANGAJ01
|
| NCBI TaxID |
29466
|
| Isolation Source |
fecal sample
|
| Geo Location |
USA:Chicago
|
