Genome Meta Information: Staphylococcus haemolyticus 4M (GCA_024722415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_024722415.1 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus 4M | ||
| Strain or Isolate | 4M | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Illumina MiSeq; Oxford Nanopore MinION | ||
| Genome Coverage | 50 | ||
| Contigs |
|
||
| Total Sequence Length | 2,608,257 (bp) | ||
| GC Percentage | 32.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/722/415/GCA_024722415.1_ASM2472241v1 | ||
| CDS | 2516 | ||
| Genes | 2682 | ||
| mRNA | 2682 | ||
| misc RNA | 81 | ||
| rRNA | 19 | ||
| tRNA | 65 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.42 % | ||
| CheckM Completeness | 98.84 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2472241v1 |
| GenBank Assembly Accession | GCA_024722415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN30148943 [NCBI] |
| BioProject | PRJNA865942 [NCBI] |
| Submitter | Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences |
| Submission Date | 2022-08-04T09:43:04.180 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1283 |
| Isolation Source | milk |
| Geo Location | Russia: Moscow region |
