Genome Meta Information: Aerococcus viridans p3-SID91 (GCA_025144985.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025144985.1 | ||
| HOMD Taxon-ID | HMT-312 | ||
| Species Name (in use by HOMD) | Aerococcus viridans | ||
| Organism Name (as deposited) | HMT-312 Aerococcus viridans p3-SID91 | ||
| Strain or Isolate | p3-SID91 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Aerococcus; s__Aerococcus viridans_C |
||
| Sequencing Technology | Illumina NextSeq 550 | ||
| Genome Coverage | 176.0x | ||
| Contigs |
|
||
| Total Sequence Length | 1,975,416 (bp) | ||
| GC Percentage | 39.42 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/144/985/GCA_025144985.1_ASM2514498v1 | ||
| CDS | 1808 | ||
| Genes | 1897 | ||
| mRNA | 1897 | ||
| misc RNA | 34 | ||
| rRNA | 3 | ||
| tRNA | 51 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.51 % | ||
| CheckM Completeness | 98.35 % | ||
| CheckM Contamination | 0.84 % | ||
| CheckM2 Completeness | 99.91 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2514498v1 |
| GenBank Assembly Accession | GCA_025144985.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025144985.1 [NCBI] |
| BioSample | SAMN25653394 [NCBI] |
| BioProject | PRJNA803478 [NCBI] |
| Submitter | University of Wisconsin - Madison |
| Submission Date | 2022-02-04T14:00:11.120 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JALXKY01 |
| NCBI TaxID | 1377 |
| Isolation Source | Axillary-groin swab |
| Geo Location | USA: Wisconsin, Madison |
