Genome Meta Information: Hoylesella buccalis ATCC 35310 (GCA_025151385.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025151385.1 | ||
| HOMD Taxon-ID | HMT-0562 | ||
| Species Name (in use by HOMD) | Hoylesella buccalis | ||
| Organism Name (as deposited) | HMT-562 Hoylesella buccalis ATCC 35310 | ||
| Strain or Isolate | ATCC 35310 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella buccalis |
||
| Sequencing Technology | Illumina HiSeq; Oxford Nanopore | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 3,307,707 (bp) | ||
| GC Percentage | 45.3 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/151/385/GCA_025151385.1_ASM2515138v1 | ||
| CDS | 2833 | ||
| Genes | 2915 | ||
| mRNA | 2915 | ||
| misc RNA | 19 | ||
| rRNA | 9 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.58 % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 0.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2515138v1 |
| GenBank Assembly Accession | GCA_025151385.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025151385.1 [NCBI] |
| BioSample | SAMN20222704 [NCBI] |
| BioProject | PRJNA746600 [NCBI] |
| Submitter | Stanford University |
| Submission Date | 2021-07-14T17:26:20.236 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 679190 |
| Isolation Source | |
| Geo Location | not applicable |
