Genome Meta Information: Dietzia cinnamea p3-SID1379 (GCA_025151765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025151765.1 | ||
| HOMD Taxon-ID | HMT-0368 | ||
| Species Name (in use by HOMD) | Dietzia cinnamea | ||
| Organism Name (as deposited) | HMT-368 Dietzia cinnamea p3-SID1379 | ||
| Strain or Isolate | p3-SID1379 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Dietzia; s__Dietzia cinnamea |
||
| Sequencing Technology | Illumina NextSeq 550 | ||
| Genome Coverage | 77 | ||
| Contigs |
|
||
| Total Sequence Length | 3,379,007 (bp) | ||
| GC Percentage | 71.03 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/151/765/GCA_025151765.1_ASM2515176v1 | ||
| CDS | 3119 | ||
| Genes | 3201 | ||
| mRNA | 3201 | ||
| misc RNA | 21 | ||
| rRNA | 3 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.19 % | ||
| CheckM Completeness | 99.16 % | ||
| CheckM Contamination | 0.28 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2515176v1 |
| GenBank Assembly Accession | GCA_025151765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025151765.1 [NCBI] |
| BioSample | SAMN25653527 [NCBI] |
| BioProject | PRJNA803478 [NCBI] |
| Submitter | University of Wisconsin - Madison |
| Submission Date | 2022-02-04T14:00:12.767 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JALXVR01 |
| NCBI TaxID | 321318 |
| Isolation Source | Alar crease swab |
| Geo Location | USA: Wisconsin, Madison |
