Genome Meta Information: Staphylococcus schleiferi IVB6180 (GCA_025558345.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025558345.1 | ||
| HOMD Taxon-ID | HMT-0233 | ||
| Species Name (in use by HOMD) | Staphylococcus schleiferi | ||
| Organism Name (as deposited) | HMT-233 Staphylococcus schleiferi IVB6180 | ||
| Strain or Isolate | IVB6180 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus schleiferi |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 484 | ||
| Contigs |
|
||
| Total Sequence Length | 2,520,333 (bp) | ||
| GC Percentage | 36.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/558/345/GCA_025558345.1_ASM2555834v1 | ||
| CDS | 2329 | ||
| Genes | 2516 | ||
| mRNA | 2516 | ||
| misc RNA | 111 | ||
| rRNA | 16 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.86 % | ||
| CheckM Completeness | 98.33 % | ||
| CheckM Contamination | 0.99 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2555834v1 |
| GenBank Assembly Accession | GCA_025558345.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025558345.1 [NCBI] |
| BioSample | SAMN26923375 [NCBI] |
| BioProject | PRJNA819273 [NCBI] |
| Submitter | University of Bern |
| Submission Date | 2022-03-24T09:41:06.037 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1295 |
| Isolation Source | Ear swab |
| Geo Location | Kenya:Marsabit |
