Genome Meta Information: Hominimerdicola aceti Sanger_31 (GCA_025567495.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025567495.1 | ||
| HOMD Taxon-ID | HMT-0962 | ||
| Species Name (in use by HOMD) | Hominimerdicola aceti | ||
| Organism Name (as deposited) | HMT-962 Hominimerdicola aceti Sanger_31 | ||
| Strain or Isolate | Sanger_31 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Hominimerdicola; s__Hominimerdicola aceti |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 50 | ||
| Contigs |
|
||
| Total Sequence Length | 2,965,035 (bp) | ||
| GC Percentage | 42.37 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/567/495/GCA_025567495.1_ASM2556749v1 | ||
| CDS | 2797 | ||
| Genes | 2876 | ||
| mRNA | 2876 | ||
| misc RNA | 24 | ||
| rRNA | 4 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.76 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2556749v1 |
| GenBank Assembly Accession | GCA_025567495.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025567495.1 [NCBI] |
| BioSample | SAMN30962691 [NCBI] |
| BioProject | PRJNA883234 [NCBI] |
| Submitter | UniKlinik RWTH Aachen |
| Submission Date | 2022-09-22T11:14:06.400 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAOQJZ01 |
| NCBI TaxID | 2981726 |
| Isolation Source | feces |
| Geo Location | United Kingdom |
