Genome Meta Information: Streptococcus thermophilus CNRZ385 (GCA_025948295.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_025948295.1 | ||
| HOMD Taxon-ID | HMT-0152 | ||
| Species Name (in use by HOMD) | Streptococcus thermophilus | ||
| Organism Name (as deposited) | HMT-152 Streptococcus thermophilus CNRZ385 | ||
| Strain or Isolate | CNRZ385 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus thermophilus |
||
| Sequencing Technology | PacBio RSII; Illumina MiSeq | ||
| Genome Coverage | 304 | ||
| Contigs |
|
||
| Total Sequence Length | 1,897,009 (bp) | ||
| GC Percentage | 39.07 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/948/295/GCA_025948295.1_ASM2594829v1 | ||
| CDS | 1995 | ||
| Genes | 2165 | ||
| mRNA | 2165 | ||
| misc RNA | 84 | ||
| rRNA | 18 | ||
| tRNA | 67 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.76 % | ||
| CheckM Completeness | 97.69 % | ||
| CheckM Contamination | 1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2594829v1 |
| GenBank Assembly Accession | GCA_025948295.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_025948295.1 [NCBI] |
| BioSample | SAMN16933252 [NCBI] |
| BioProject | PRJNA681853 [NCBI] |
| Submitter | University College Cork |
| Submission Date | 2020-11-27T05:37:05.603 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1308 |
| Isolation Source | Dairy |
| Geo Location | Ireland |
