Taxon Table | Genome Table
Genome Meta Information:
Streptococcus
vestibularis
D13009425 (GCA_026781275.1)
| HOMD Genome-ID |
GCA_026781275.1
|
| HOMD Taxon-ID |
HMT-0021
|
| Species Name (in use by HOMD) |
Streptococcus vestibularis
|
| Organism Name (as deposited) |
HMT-021 Streptococcus vestibularis D13009425
|
| Strain or Isolate |
D13009425
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;
s__Streptococcus vestibularis |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
65.56
|
| Contigs |
Number of Contigs: 183
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,919,327 (bp) |
| GC Percentage |
39.63
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/781/275/GCA_026781275.1_ASM2678127v1
|
| CDS |
1855
|
| Genes |
1920
|
| mRNA |
1920
|
| misc RNA |
37
|
| rRNA |
3
|
| tRNA |
24
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.32 %
|
| CheckM Completeness |
98.29 %
|
| CheckM Contamination |
1.99 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM2678127v1
|
| GenBank Assembly Accession |
GCA_026781275.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_026781275.1
[NCBI]
|
| BioSample |
SAMN26135100
[NCBI]
|
| BioProject |
PRJNA808899
[NCBI]
|
| Submitter |
Region Zealand
|
| Submission Date |
2022-02-21T10:09:06.940
|
| Assembly Method |
|
| Assembly Level |
Scaffold
|
| Sequencing Status |
|
| WGS
Project |
JAKUUY01
|
| NCBI TaxID |
1343
|
| Isolation Source |
blood
|
| Geo Location |
Denmark:Odense
|
