Genome Meta Information: Streptococcus anginosus 100993296213 (GCA_026784025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_026784025.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus 100993296213 | ||
| Strain or Isolate | 100993296213 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus anginosus |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 256.06 | ||
| Contigs |
|
||
| Total Sequence Length | 1,797,386 (bp) | ||
| GC Percentage | 38.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/784/025/GCA_026784025.1_ASM2678402v1 | ||
| CDS | 1744 | ||
| Genes | 1818 | ||
| mRNA | 1818 | ||
| misc RNA | 33 | ||
| rRNA | 3 | ||
| tRNA | 37 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.04 % | ||
| CheckM Completeness | 97.04 % | ||
| CheckM Contamination | 0.46 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2678402v1 |
| GenBank Assembly Accession | GCA_026784025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_026784025.1 [NCBI] |
| BioSample | SAMN26134983 [NCBI] |
| BioProject | PRJNA808899 [NCBI] |
| Submitter | Region Zealand |
| Submission Date | 2022-02-21T10:09:05.100 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAKUZG01 |
| NCBI TaxID | 1328 |
| Isolation Source | blood |
| Geo Location | Denmark:Herlev |
