Genome Meta Information: Actinomyces israelii ATCC 10048 (GCA_026891875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_026891875.1 | ||
| HOMD Taxon-ID | HMT-645 | ||
| Species Name (in use by HOMD) | Actinomyces israelii | ||
| Organism Name (as deposited) | HMT-645 Actinomyces israelii ATCC 10048 | ||
| Strain or Isolate | ATCC 10048 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces israelii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 364.0x | ||
| Contigs |
|
||
| Total Sequence Length | 3,873,991 (bp) | ||
| GC Percentage | 71.55 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/891/875/GCA_026891875.1_ASM2689187v1 | ||
| CDS | 3172 | ||
| Genes | 3246 | ||
| mRNA | 3246 | ||
| misc RNA | 17 | ||
| rRNA | 0 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.46 % | ||
| CheckM Completeness | 97.63 % | ||
| CheckM Contamination | 1.18 % | ||
| CheckM2 Completeness | 99.98 % | ||
| CheckM2 Contamination | 0.63 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2689187v1 |
| GenBank Assembly Accession | GCA_026891875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_026891875.1 [NCBI] |
| BioSample | SAMN31276741 [NCBI] |
| BioProject | PRJNA890381 [NCBI] |
| Submitter | The University of Hong Kong |
| Submission Date | 2022-10-13T23:19:03.376 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAPTMY01 |
| NCBI TaxID | 1659 |
| Isolation Source | |
| Geo Location | missing |
