Genome Meta Information: Campylobacter ureolyticus URMC_789 (GCA_027277305.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_027277305.1 | ||
| HOMD Taxon-ID | HMT-0842 | ||
| Species Name (in use by HOMD) | Campylobacter ureolyticus | ||
| Organism Name (as deposited) | HMT-842 Campylobacter ureolyticus URMC_789 | ||
| Strain or Isolate | URMC_789 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B ureolyticus |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 83.09 | ||
| Contigs |
|
||
| Total Sequence Length | 1,621,745 (bp) | ||
| GC Percentage | 29.24 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/027/277/305/GCA_027277305.1_ASM2727730v1 | ||
| CDS | 1671 | ||
| Genes | 1719 | ||
| mRNA | 1719 | ||
| misc RNA | 5 | ||
| rRNA | 2 | ||
| tRNA | 40 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.83 % | ||
| CheckM Completeness | 97.42 % | ||
| CheckM Contamination | 0.82 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2727730v1 |
| GenBank Assembly Accession | GCA_027277305.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_027277305.1 [NCBI] |
| BioSample | SAMN32329977 [NCBI] |
| BioProject | PRJNA914250 [NCBI] |
| Submitter | University of Rochester Medical Center |
| Submission Date | 2022-12-20T12:28:05.700 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAPXGM01 |
| NCBI TaxID | 827 |
| Isolation Source | wound |
| Geo Location | USA: New York |
