Genome Meta Information: Streptococcus parasanguinis 1001095st1_G10_1001095IJ_161003 (GCA_028326025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_028326025.1 | ||
| HOMD Taxon-ID | HMT-0411 | ||
| Species Name (in use by HOMD) | Streptococcus parasanguinis | ||
| Organism Name (as deposited) | HMT-411 Streptococcus parasanguinis 1001095st1_G10_1001095IJ_161003 | ||
| Strain or Isolate | 1001095st1_G10_1001095IJ_161003 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus parasanguinis_Q |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 26.9477 | ||
| Contigs |
|
||
| Total Sequence Length | 2,152,783 (bp) | ||
| GC Percentage | 41.74 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/028/326/025/GCA_028326025.1_ASM2832602v1 | ||
| CDS | 2039 | ||
| Genes | 2124 | ||
| mRNA | 2124 | ||
| misc RNA | 37 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.93 % | ||
| CheckM Completeness | 99.43 % | ||
| CheckM Contamination | 2.7 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2832602v1 |
| GenBank Assembly Accession | GCA_028326025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_028326025.1 [NCBI] |
| BioSample | SAMN31322926 [NCBI] |
| BioProject | PRJNA880610 [NCBI] |
| Submitter | Icahn School of Medicine |
| Submission Date | 2022-10-17T16:27:16.811 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAQMJZ01 |
| NCBI TaxID | 1318 |
| Isolation Source | |
| Geo Location | USA |
