Genome Meta Information: Bacteroides stercoris 1001283st1_H1_1001283B150304_161114 (GCA_028399565.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_028399565.1 | ||
| HOMD Taxon-ID | HMT-969 | ||
| Species Name (in use by HOMD) | Bacteroides stercoris | ||
| Organism Name (as deposited) | HMT-969 Bacteroides stercoris 1001283st1_H1_1001283B150304_161114 | ||
| Strain or Isolate | 1001283st1_H1_1001283B150304_161114 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides; s__Bacteroides stercoris |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 32.5x | ||
| Contigs |
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| Total Sequence Length | 3,928,105 (bp) | ||
| GC Percentage | 45.87 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/028/399/565/GCA_028399565.1_ASM2839956v1 | ||
| CDS | 3245 | ||
| Genes | 3317 | ||
| mRNA | 3317 | ||
| misc RNA | 18 | ||
| rRNA | 3 | ||
| tRNA | 51 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | 98.84 % | ||
| CheckM Completeness | 98.88 % | ||
| CheckM Contamination | 1.18 % | ||
| CheckM2 Completeness | 99.77 % | ||
| CheckM2 Contamination | 0.78 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2839956v1 |
| GenBank Assembly Accession | GCA_028399565.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_028399565.1 [NCBI] |
| BioSample | SAMN31320693 [NCBI] |
| BioProject | PRJNA880610 [NCBI] |
| Submitter | Icahn School of Medicine |
| Submission Date | 2022-10-17T16:24:12.955 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JAQNVY01 |
| NCBI TaxID | 46506 |
| Isolation Source | |
| Geo Location | USA |
