Genome Meta Information: Corynebacterium striatum SCPM-O-B-9438 (R546) (GCA_028527755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_028527755.1 | ||
| HOMD Taxon-ID | HMT-0072 | ||
| Species Name (in use by HOMD) | Corynebacterium striatum | ||
| Organism Name (as deposited) | HMT-072 Corynebacterium striatum SCPM-O-B-9438 (R546) | ||
| Strain or Isolate | SCPM-O-B-9438 (R546) | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium striatum |
||
| Sequencing Technology | MGISeq-2000 | ||
| Genome Coverage | 208.62 | ||
| Contigs |
|
||
| Total Sequence Length | 2,801,090 (bp) | ||
| GC Percentage | 59.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/028/527/755/GCA_028527755.1_ASM2852775v1 | ||
| CDS | 2564 | ||
| Genes | 2630 | ||
| mRNA | 2630 | ||
| misc RNA | 7 | ||
| rRNA | 3 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.64 % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0.17 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2852775v1 |
| GenBank Assembly Accession | GCA_028527755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_028527755.1 [NCBI] |
| BioSample | SAMN31031751 [NCBI] |
| BioProject | PRJNA269675 [NCBI] |
| Submitter | SRCAMB |
| Submission Date | 2022-09-27T07:13:03.780 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQPSM01 |
| NCBI TaxID | 43770 |
| Isolation Source | wound discharge |
| Geo Location | Russia: Rostov-na-Donu |
