Genome Meta Information: Streptococcus oralis D7B5 (GCA_029691405.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_029691405.1 | ||
| HOMD Taxon-ID | HMT-0707 | ||
| Species Name (in use by HOMD) | Streptococcus oralis | ||
| Organism Name (as deposited) | HMT-707 Streptococcus oralis subsp. oralis D7B5 | ||
| Strain or Isolate | D7B5 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sp029691405 |
||
| Sequencing Technology | PacBio Sequel | ||
| Genome Coverage | 678 | ||
| Contigs |
|
||
| Total Sequence Length | 1,970,732 (bp) | ||
| GC Percentage | 41.38 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/691/405/GCA_029691405.1_ASM2969140v1 | ||
| CDS | 1802 | ||
| Genes | 1919 | ||
| mRNA | 1919 | ||
| misc RNA | 42 | ||
| rRNA | 12 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2969140v1 |
| GenBank Assembly Accession | GCA_029691405.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_029691405.1 [NCBI] |
| BioSample | SAMN34001254 [NCBI] |
| BioProject | PRJNA950535 [NCBI] |
| Submitter | Ming Chuan University |
| Submission Date | 2023-03-30T22:06:04.316 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 3038077 |
| Isolation Source | |
| Geo Location | Taiwan: Taoyuan City |
