Genome Meta Information: Fusobacterium vincentii Fn11kaz (GCA_029846465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_029846465.1 | ||
| HOMD Taxon-ID | HMT-0200 | ||
| Species Name (in use by HOMD) | Fusobacterium vincentii | ||
| Organism Name (as deposited) | HMT-200 Fusobacterium vincentii Fn11kaz | ||
| Strain or Isolate | Fn11kaz | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium vincentii |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 61 | ||
| Contigs |
|
||
| Total Sequence Length | 2,134,385 (bp) | ||
| GC Percentage | 26.91 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/846/465/GCA_029846465.1_ASM2984646v1 | ||
| CDS | 1980 | ||
| Genes | 2045 | ||
| mRNA | 2045 | ||
| misc RNA | 19 | ||
| rRNA | 2 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.43 % | ||
| CheckM Completeness | 98.63 % | ||
| CheckM Contamination | 0.32 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2984646v1 |
| GenBank Assembly Accession | GCA_029846465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMN34136110 [NCBI] |
| BioProject | PRJNA954179 [NCBI] |
| Submitter | National Center for Biotechnology |
| Submission Date | 2023-04-11T03:52:04.737 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JARWBA01 |
| NCBI TaxID | 851 |
| Isolation Source | colon biopsy |
| Geo Location | Kazakhstan: Astana |
