Genome Meta Information: Enterobacter cancerogenus V87_3 (GCA_029967835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_029967835.1 | ||
| HOMD Taxon-ID | HMT-0565 | ||
| Species Name (in use by HOMD) | Enterobacter cancerogenus | ||
| Organism Name (as deposited) | HMT-565 Enterobacter cancerogenus V87_3 | ||
| Strain or Isolate | V87_3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter; s__Enterobacter cancerogenus |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 104 | ||
| Contigs |
|
||
| Total Sequence Length | 4,706,154 (bp) | ||
| GC Percentage | 55.7 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/029/967/835/GCA_029967835.1_ASM2996783v1 | ||
| CDS | 4337 | ||
| Genes | 4559 | ||
| mRNA | 4559 | ||
| misc RNA | 169 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.3 % | ||
| CheckM Contamination | 0.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM2996783v1 |
| GenBank Assembly Accession | GCA_029967835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_029967835.1 [NCBI] |
| BioSample | SAMN34510218 [NCBI] |
| BioProject | PRJNA965940 [NCBI] |
| Submitter | Max Rubner-Institut |
| Submission Date | 2023-05-02T06:08:04.286 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASCAM01 |
| NCBI TaxID | 3044236 |
| Isolation Source | Lettuce |
| Geo Location | South Korea: Wanju |
