Genome Meta Information: Streptococcus anginosus S6 5008-2 (GCA_030027035.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030027035.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus S6 5008-2 | ||
| Strain or Isolate | S6 5008-2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus vaginalis |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 412 | ||
| Contigs |
|
||
| Total Sequence Length | 2,001,769 (bp) | ||
| GC Percentage | 38.67 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/027/035/GCA_030027035.1_ASM3002703v1 | ||
| CDS | 2033 | ||
| Genes | 2113 | ||
| mRNA | 2113 | ||
| misc RNA | 40 | ||
| rRNA | 3 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.32 % | ||
| CheckM Completeness | 91.07 % | ||
| CheckM Contamination | 1.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3002703v1 |
| GenBank Assembly Accession | GCA_030027035.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030027035.1 [NCBI] |
| BioSample | SAMN34495011 [NCBI] |
| BioProject | PRJNA684628 [NCBI] |
| Submitter | University of Alabama in Huntsville |
| Submission Date | 2023-05-01T16:16:06.053 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASENE01 |
| NCBI TaxID | 1328 |
| Isolation Source | |
| Geo Location | USA: Durham, NC |
