Genome Meta Information: Cutibacterium acnes W80 (GCA_030166615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030166615.1 | ||
| HOMD Taxon-ID | HMT-0530 | ||
| Species Name (in use by HOMD) | Cutibacterium acnes | ||
| Organism Name (as deposited) | HMT-530 Cutibacterium acnes W80 | ||
| Strain or Isolate | W80 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium; s__Cutibacterium acnes |
||
| Sequencing Technology | Illumina NovaSeq, Oxford Nanopore GridION | ||
| Genome Coverage | 91 | ||
| Contigs |
|
||
| Total Sequence Length | 2,560,578 (bp) | ||
| GC Percentage | 60.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/166/615/GCA_030166615.1_ASM3016661v1 | ||
| CDS | 2362 | ||
| Genes | 2445 | ||
| mRNA | 2445 | ||
| misc RNA | 23 | ||
| rRNA | 11 | ||
| tRNA | 47 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.15 % | ||
| CheckM Completeness | 97.48 % | ||
| CheckM Contamination | 0.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3016661v1 |
| GenBank Assembly Accession | GCA_030166615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030166615.1 [NCBI] |
| BioSample | SAMN35448566 [NCBI] |
| BioProject | PRJNA977060 [NCBI] |
| Submitter | University of Utah School of Medicine |
| Submission Date | 2023-05-28T13:24:04.340 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1747 |
| Isolation Source | |
| Geo Location | USA: Salt Lake City |
