Genome Meta Information: Corynebacterium accolens KPL4065 (GCA_030175915.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030175915.1 | ||
| HOMD Taxon-ID | HMT-0019 | ||
| Species Name (in use by HOMD) | Corynebacterium accolens | ||
| Organism Name (as deposited) | HMT-019 Corynebacterium accolens KPL4065 | ||
| Strain or Isolate | KPL4065 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium accolens |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 96 | ||
| Contigs |
|
||
| Total Sequence Length | 2,476,050 (bp) | ||
| GC Percentage | 59.48 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/175/915/GCA_030175915.1_ASM3017591v1 | ||
| CDS | 2279 | ||
| Genes | 2346 | ||
| mRNA | 2346 | ||
| misc RNA | 7 | ||
| rRNA | 3 | ||
| tRNA | 55 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 97.01 % | ||
| CheckM Completeness | 96.58 % | ||
| CheckM Contamination | 3.65 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3017591v1 |
| GenBank Assembly Accession | GCA_030175915.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030175915.1 [NCBI] |
| BioSample | SAMN35023429 [NCBI] |
| BioProject | PRJNA842433 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2023-05-10T13:53:18.010 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASNTZ01 |
| NCBI TaxID | 38284 |
| Isolation Source | |
| Geo Location | USA |
