Genome Meta Information: Corynebacterium propinquum KPL3953 (GCA_030176415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030176415.1 | ||
| HOMD Taxon-ID | HMT-0059 | ||
| Species Name (in use by HOMD) | Corynebacterium propinquum | ||
| Organism Name (as deposited) | HMT-059 Corynebacterium propinquum KPL3953 | ||
| Strain or Isolate | KPL3953 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium propinquum |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 92 | ||
| Contigs |
|
||
| Total Sequence Length | 2,507,113 (bp) | ||
| GC Percentage | 56.47 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/176/415/GCA_030176415.1_ASM3017641v1 | ||
| CDS | 2272 | ||
| Genes | 2329 | ||
| mRNA | 2329 | ||
| misc RNA | 6 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.42 % | ||
| CheckM Completeness | 98.58 % | ||
| CheckM Contamination | 0.41 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3017641v1 |
| GenBank Assembly Accession | GCA_030176415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030176415.1 [NCBI] |
| BioSample | SAMN35023420 [NCBI] |
| BioProject | PRJNA842433 [NCBI] |
| Submitter | Baylor College of Medicine |
| Submission Date | 2023-05-10T13:53:17.893 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASNUG01 |
| NCBI TaxID | 43769 |
| Isolation Source | |
| Geo Location | USA |
