Taxon Table | Genome Table
Genome Meta Information:
Fusobacterium
necrophorum
BRON_3 (GCA_030180865.1)
| HOMD Genome-ID |
GCA_030180865.1
|
| HOMD Taxon-ID |
HMT-0690
|
| Species Name (in use by HOMD) |
Fusobacterium necrophorum
|
| Organism Name (as deposited) |
HMT-690 Fusobacterium necrophorum BRON_3
|
| Strain or Isolate |
BRON_3
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C;
s__Fusobacterium_C necrophorum |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
30
|
| Contigs |
Number of Contigs: 120
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,428,055 (bp) |
| GC Percentage |
35.07
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/180/865/GCA_030180865.1_ASM3018086v1
|
| CDS |
2425
|
| Genes |
2507
|
| mRNA |
2507
|
| misc RNA |
26
|
| rRNA |
7
|
| tRNA |
48
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.39 %
|
| CheckM Completeness |
98.1 %
|
| CheckM Contamination |
5.13 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM3018086v1
|
| GenBank Assembly Accession |
GCA_030180865.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_030180865.1
[NCBI]
|
| BioSample |
SAMN27384970
[NCBI]
|
| BioProject |
PRJNA824050
[NCBI]
|
| Submitter |
Cardiff Metropolitan University
|
| Submission Date |
2022-04-06T13:37:04.497
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JAMGTP01
|
| NCBI TaxID |
859
|
| Isolation Source |
throat
|
| Geo Location |
United Kingdom:Aberystwyth
|
