Taxon Table | Genome Table
Genome Meta Information:
Kingella
kingae
IDOPH1 (GCA_030182205.1)
| HOMD Genome-ID |
GCA_030182205.1
|
| HOMD Taxon-ID |
HMT-0646
|
| Species Name (in use by HOMD) |
Kingella kingae
|
| Organism Name (as deposited) |
HMT-646 Kingella kingae IDOPH1
|
| Strain or Isolate |
IDOPH1
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Kingella;
s__Kingella kingae |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
45
|
| Contigs |
Number of Contigs: 219
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,967,805 (bp) |
| GC Percentage |
46.7
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/182/205/GCA_030182205.1_ASM3018220v1
|
| CDS |
1948
|
| Genes |
2006
|
| mRNA |
2006
|
| misc RNA |
20
|
| rRNA |
3
|
| tRNA |
34
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.53 %
|
| CheckM Completeness |
98.09 %
|
| CheckM Contamination |
0.65 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
Ambiguous
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM3018220v1
|
| GenBank Assembly Accession |
GCA_030182205.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_030182205.1
[NCBI]
|
| BioSample |
SAMN31544738
[NCBI]
|
| BioProject |
PRJNA896475
[NCBI]
|
| Submitter |
University of Pennsylvania
|
| Submission Date |
2022-11-01T07:26:04.223
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JARXSV01
|
| NCBI TaxID |
504
|
| Isolation Source |
missing
|
| Geo Location |
missing
|
