Genome Meta Information: Corynebacterium simulans UMB3162 (GCA_030217125.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030217125.1 | ||
| HOMD Taxon-ID | HMT-0062 | ||
| Species Name (in use by HOMD) | Corynebacterium simulans | ||
| Organism Name (as deposited) | HMT-062 Corynebacterium simulans UMB3162 | ||
| Strain or Isolate | UMB3162 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium simulans |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 53.5772 | ||
| Contigs |
|
||
| Total Sequence Length | 2,646,359 (bp) | ||
| GC Percentage | 59.22 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/217/125/GCA_030217125.1_ASM3021712v1 | ||
| CDS | 2489 | ||
| Genes | 2549 | ||
| mRNA | 2549 | ||
| misc RNA | 7 | ||
| rRNA | 3 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.63 % | ||
| CheckM Completeness | 99.28 % | ||
| CheckM Contamination | 0.07 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3021712v1 |
| GenBank Assembly Accession | GCA_030217125.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030217125.1 [NCBI] |
| BioSample | SAMN34996534 [NCBI] |
| BioProject | PRJNA970254 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2023-05-08T11:18:08.833 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASONE01 |
| NCBI TaxID | 146827 |
| Isolation Source | |
| Geo Location | USA: Maywood, IL |
