Taxon Table | Genome Table
Genome Meta Information:
Haemophilus
parainfluenzae
UMB1048 (GCA_030218125.1)
| HOMD Genome-ID |
GCA_030218125.1
|
| HOMD Taxon-ID |
HMT-0718
|
| Species Name (in use by HOMD) |
Haemophilus parainfluenzae
|
| Organism Name (as deposited) |
HMT-718 Haemophilus parainfluenzae UMB1048
|
| Strain or Isolate |
UMB1048
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_D;
s__Haemophilus_D sp014931275 |
| Sequencing Technology |
Illumina NextSeq
|
| Genome Coverage |
644.811
|
| Contigs |
Number of Contigs: 236
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,039,267 (bp) |
| GC Percentage |
39.8
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/218/125/GCA_030218125.1_ASM3021812v1
|
| CDS |
1881
|
| Genes |
1968
|
| mRNA |
1968
|
| misc RNA |
28
|
| rRNA |
6
|
| tRNA |
52
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
99.77 %
|
| CheckM Contamination |
1.68 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM3021812v1
|
| GenBank Assembly Accession |
GCA_030218125.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_030218125.1
[NCBI]
|
| BioSample |
SAMN34996480
[NCBI]
|
| BioProject |
PRJNA970254
[NCBI]
|
| Submitter |
Loyola University Chicago
|
| Submission Date |
2023-05-08T11:18:08.253
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JASOPB01
|
| NCBI TaxID |
3046322
|
| Isolation Source |
|
| Geo Location |
USA: Maywood, IL
|
