Genome Meta Information: Streptococcus australis UMB5615B (GCA_030228465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030228465.1 | ||
| HOMD Taxon-ID | HMT-0073 | ||
| Species Name (in use by HOMD) | Streptococcus australis | ||
| Organism Name (as deposited) | HMT-073 Streptococcus australis UMB5615B | ||
| Strain or Isolate | UMB5615B | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus xiaochunlingii |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 274.248 | ||
| Contigs |
|
||
| Total Sequence Length | 1,898,495 (bp) | ||
| GC Percentage | 42.04 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/228/465/GCA_030228465.1_ASM3022846v1 | ||
| CDS | 1836 | ||
| Genes | 1911 | ||
| mRNA | 1911 | ||
| misc RNA | 35 | ||
| rRNA | 2 | ||
| tRNA | 37 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.01 % | ||
| CheckM Completeness | 99.9 % | ||
| CheckM Contamination | 0.06 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3022846v1 |
| GenBank Assembly Accession | GCA_030228465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030228465.1 [NCBI] |
| BioSample | SAMN35153930 [NCBI] |
| BioProject | PRJNA970254 [NCBI] |
| Submitter | Loyola University Chicago |
| Submission Date | 2023-05-18T09:46:07.756 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JASPBQ01 |
| NCBI TaxID | 2589788 |
| Isolation Source | urine |
| Geo Location | USA: Maywood, IL |
