Genome Meta Information: Corynebacterium bovis DSM 20582 (GCA_030408615.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030408615.1 | ||
| HOMD Taxon-ID | HMT-0208 | ||
| Species Name (in use by HOMD) | Corynebacterium bovis | ||
| Organism Name (as deposited) | HMT-208 Corynebacterium bovis DSM 20582 | ||
| Strain or Isolate | DSM 20582 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium bovis |
||
| Sequencing Technology | Illumina MiSeq; Oxford Nanopore | ||
| Genome Coverage | 104.4 | ||
| Contigs |
|
||
| Total Sequence Length | 2,652,582 (bp) | ||
| GC Percentage | 72.91 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/408/615/GCA_030408615.1_ASM3040861v1 | ||
| CDS | 2092 | ||
| Genes | 2171 | ||
| mRNA | 2171 | ||
| misc RNA | 9 | ||
| rRNA | 9 | ||
| tRNA | 59 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 97.62 % | ||
| CheckM Contamination | 0.13 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3040861v1 |
| GenBank Assembly Accession | GCA_030408615.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030408615.1 [NCBI] |
| BioSample | SAMN13404512 [NCBI] |
| BioProject | PRJNA454022 [NCBI] |
| Submitter | Bielefeld University |
| Submission Date | 2019-11-27T05:40:30.406 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 927655 |
| Isolation Source | milk |
| Geo Location | missing |
