Genome Meta Information: Streptococcus parasanguinis SP8 (GCA_030440045.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030440045.1 | ||
| HOMD Taxon-ID | HMT-0411 | ||
| Species Name (in use by HOMD) | Streptococcus parasanguinis | ||
| Organism Name (as deposited) | HMT-411 Streptococcus parasanguinis SP8 | ||
| Strain or Isolate | SP8 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus parasanguinis_I |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 29 | ||
| Contigs |
|
||
| Total Sequence Length | 2,224,732 (bp) | ||
| GC Percentage | 41.55 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/440/045/GCA_030440045.1_ASM3044004v1 | ||
| CDS | 2143 | ||
| Genes | 2235 | ||
| mRNA | 2235 | ||
| misc RNA | 37 | ||
| rRNA | 4 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.61 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3044004v1 |
| GenBank Assembly Accession | GCA_030440045.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030440045.1 [NCBI] |
| BioSample | SAMN32531164 [NCBI] |
| BioProject | PRJNA917188 [NCBI] |
| Submitter | University Hospital Dresden |
| Submission Date | 2023-01-02T06:03:05.090 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAQFJL01 |
| NCBI TaxID | 3018252 |
| Isolation Source | sputum |
| Geo Location | Germany |
