Genome Meta Information: Corynebacterium mucifaciens P4_C2 (GCA_030486815.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030486815.1 | ||
| HOMD Taxon-ID | HMT-0835 | ||
| Species Name (in use by HOMD) | Corynebacterium mucifaciens | ||
| Organism Name (as deposited) | HMT-835 Corynebacterium mucifaciens P4_C2 | ||
| Strain or Isolate | P4_C2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium mucifaciens |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 216 | ||
| Contigs |
|
||
| Total Sequence Length | 2,037,780 (bp) | ||
| GC Percentage | 65.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/486/815/GCA_030486815.1_ASM3048681v1 | ||
| CDS | 1971 | ||
| Genes | 2038 | ||
| mRNA | 2038 | ||
| misc RNA | 9 | ||
| rRNA | 3 | ||
| tRNA | 54 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.91 % | ||
| CheckM Completeness | 97.48 % | ||
| CheckM Contamination | 0.62 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3048681v1 |
| GenBank Assembly Accession | GCA_030486815.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030486815.1 [NCBI] |
| BioSample | SAMN36295143 [NCBI] |
| BioProject | PRJNA991496 [NCBI] |
| Submitter | Aarhus University |
| Submission Date | 2023-07-05T10:57:03.910 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAUKFR01 |
| NCBI TaxID | 401472 |
| Isolation Source | skin swab cheek |
| Geo Location | Denmark: Aarhus |
