Genome Meta Information: Staphylococcus hominis CONS_ST78 (GCA_030503475.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030503475.1 | ||
| HOMD Taxon-ID | HMT-0127 | ||
| Species Name (in use by HOMD) | Staphylococcus hominis | ||
| Organism Name (as deposited) | HMT-127 Staphylococcus hominis CONS_ST78 | ||
| Strain or Isolate | CONS_ST78 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus hominis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 227 | ||
| Contigs |
|
||
| Total Sequence Length | 2,174,186 (bp) | ||
| GC Percentage | 31.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/503/475/GCA_030503475.1_ASM3050347v1 | ||
| CDS | 2116 | ||
| Genes | 2220 | ||
| mRNA | 2220 | ||
| misc RNA | 53 | ||
| rRNA | 4 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.08 % | ||
| CheckM Completeness | 89.19 % | ||
| CheckM Contamination | 3.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3050347v1 |
| GenBank Assembly Accession | GCA_030503475.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030503475.1 [NCBI] |
| BioSample | SAMN36373916 [NCBI] |
| BioProject | PRJNA980213 [NCBI] |
| Submitter | Stellenbosch University |
| Submission Date | 2023-07-08T14:47:05.866 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAUKOZ01 |
| NCBI TaxID | 1290 |
| Isolation Source | stool |
| Geo Location | South Africa |
