Genome Meta Information: Streptococcus oralis GP0011 (GCA_030546305.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030546305.1 | ||
| HOMD Taxon-ID | HMT-0707 | ||
| Species Name (in use by HOMD) | Streptococcus oralis | ||
| Organism Name (as deposited) | HMT-707 Streptococcus oralis subsp. oralis GP0011 | ||
| Strain or Isolate | GP0011 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus sp030546305 |
||
| Sequencing Technology | Illumina NextSeq | ||
| Genome Coverage | 828.089 | ||
| Contigs |
|
||
| Total Sequence Length | 2,109,804 (bp) | ||
| GC Percentage | 40.93 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/546/305/GCA_030546305.1_ASM3054630v1 | ||
| CDS | 2005 | ||
| Genes | 2094 | ||
| mRNA | 2094 | ||
| misc RNA | 43 | ||
| rRNA | 3 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3054630v1 |
| GenBank Assembly Accession | GCA_030546305.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030546305.1 [NCBI] |
| BioSample | SAMN36496261 [NCBI] |
| BioProject | PRJNA833080 [NCBI] |
| Submitter | University of New Hampshire |
| Submission Date | 2023-07-17T13:43:06.406 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAUONR01 |
| NCBI TaxID | 3063751 |
| Isolation Source | esophagus aspirate |
| Geo Location | USA: New Hampshire |
