Genome Meta Information: Streptococcus anginosus SMC5342 (GCA_030676835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030676835.1 | ||
| HOMD Taxon-ID | HMT-0543 | ||
| Species Name (in use by HOMD) | Streptococcus anginosus | ||
| Organism Name (as deposited) | HMT-543 Streptococcus anginosus SMC5342 | ||
| Strain or Isolate | SMC5342 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus whileyi |
||
| Sequencing Technology | Illumina NovaSeq | ||
| Genome Coverage | 702 | ||
| Contigs |
|
||
| Total Sequence Length | 2,186,043 (bp) | ||
| GC Percentage | 38.11 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/676/835/GCA_030676835.1_ASM3067683v1 | ||
| CDS | 2143 | ||
| Genes | 2243 | ||
| mRNA | 2243 | ||
| misc RNA | 50 | ||
| rRNA | 5 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.57 % | ||
| CheckM Completeness | 94.74 % | ||
| CheckM Contamination | 1.41 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3067683v1 |
| GenBank Assembly Accession | GCA_030676835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030676835.1 [NCBI] |
| BioSample | SAMN36787850 [NCBI] |
| BioProject | PRJNA994491 [NCBI] |
| Submitter | Dartmouth College |
| Submission Date | 2023-08-01T15:26:04.244 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JAUUIM01 |
| NCBI TaxID | 1328 |
| Isolation Source | |
| Geo Location | USA: NH |
