Genome Meta Information: Streptococcus thermophilus CICC 20372 (GCA_030846755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_030846755.1 | ||
| HOMD Taxon-ID | HMT-0152 | ||
| Species Name (in use by HOMD) | Streptococcus thermophilus | ||
| Organism Name (as deposited) | HMT-152 Streptococcus thermophilus CICC 20372 | ||
| Strain or Isolate | CICC 20372 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus thermophilus |
||
| Sequencing Technology | Illumina HiSeq; PacBio | ||
| Genome Coverage | 492 | ||
| Contigs |
|
||
| Total Sequence Length | 1,852,351 (bp) | ||
| GC Percentage | 39.06 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/030/846/755/GCA_030846755.1_ASM3084675v1 | ||
| CDS | 1938 | ||
| Genes | 2089 | ||
| mRNA | 2089 | ||
| misc RNA | 78 | ||
| rRNA | 15 | ||
| tRNA | 57 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.7 % | ||
| CheckM Completeness | 97.79 % | ||
| CheckM Contamination | 0.76 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 4 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM3084675v1 |
| GenBank Assembly Accession | GCA_030846755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_030846755.1 [NCBI] |
| BioSample | SAMN36973155 [NCBI] |
| BioProject | PRJNA1005081 [NCBI] |
| Submitter | Institute of Microbiology, Chinese Academy of Sciences |
| Submission Date | 2023-08-14T04:45:05.590 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1308 |
| Isolation Source | fermented milk products |
| Geo Location | China: Inner Mongolia |
