Genome Meta Information: Corynebacterium jeikeium BVI (GCA_900100745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900100745.1 | ||
| HOMD Taxon-ID | HMT-0047 | ||
| Species Name (in use by HOMD) | Corynebacterium jeikeium | ||
| Organism Name (as deposited) | HMT-047 Corynebacterium jeikeium BVI | ||
| Strain or Isolate | BVI | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium jeikeium |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,306,230 (bp) | ||
| GC Percentage | 61.6 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/100/745/GCA_900100745.1_CJ | ||
| CDS | 2013 | ||
| Genes | 2068 | ||
| mRNA | 0 | ||
| misc RNA | 7 | ||
| rRNA | 2 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.45 % | ||
| CheckM Completeness | 93.4 % | ||
| CheckM Contamination | 3.31 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | CJ |
| GenBank Assembly Accession | GCA_900100745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900100745.1 [NCBI] |
| BioSample | SAMEA4506857 [NCBI] |
| BioProject | PRJEB16021 [NCBI] |
| Submitter | CEBITEC |
| Submission Date | 2016-10-20T08:17:21.240 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | FMTZ01 |
| NCBI TaxID | 38289 |
| Isolation Source | |
| Geo Location | Colombia |
