Genome Meta Information: Staphylococcus hominis NFPP34 (GCA_900109865.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900109865.1 | ||
| HOMD Taxon-ID | HMT-0127 | ||
| Species Name (in use by HOMD) | Staphylococcus hominis | ||
| Organism Name (as deposited) | HMT-127 Staphylococcus hominis NFPP34 | ||
| Strain or Isolate | NFPP34 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus hominis |
||
| Sequencing Technology | Illumina HiSeq 2500-1TB | ||
| Genome Coverage | 528 | ||
| Contigs |
|
||
| Total Sequence Length | 2,219,443 (bp) | ||
| GC Percentage | 31.32 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/109/865/GCA_900109865.1_IMG-taxon_2599185353_annotated_assembly | ||
| CDS | 2152 | ||
| Genes | 2256 | ||
| mRNA | 2256 | ||
| misc RNA | 62 | ||
| rRNA | 4 | ||
| tRNA | 37 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.11 % | ||
| CheckM Completeness | 92.99 % | ||
| CheckM Contamination | 5.78 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2599185353 annotated |
| GenBank Assembly Accession | GCA_900109865.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900109865.1 [NCBI] |
| BioSample | SAMN03159421 [NCBI] |
| BioProject | PRJEB16878 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2014-11-03T06:47:01.697 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | FOBP01 |
| NCBI TaxID | 1290 |
| Isolation Source | |
| Geo Location | missing |
