Genome Meta Information: Streptococcus salivarius ATCC 7073 (GCA_900143035.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900143035.1 | ||
| HOMD Taxon-ID | HMT-0755 | ||
| Species Name (in use by HOMD) | Streptococcus salivarius | ||
| Organism Name (as deposited) | HMT-755 Streptococcus salivarius ATCC 7073 | ||
| Strain or Isolate | ATCC 7073 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus salivarius |
||
| Sequencing Technology | Illumina HiSeq 2500-1TB | ||
| Genome Coverage | 695 | ||
| Contigs |
|
||
| Total Sequence Length | 2,162,983 (bp) | ||
| GC Percentage | 40.24 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/143/035/GCA_900143035.1_IMG-taxon_2687453658_annotated_assembly | ||
| CDS | 1982 | ||
| Genes | 2052 | ||
| mRNA | 2052 | ||
| misc RNA | 32 | ||
| rRNA | 3 | ||
| tRNA | 34 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.96 % | ||
| CheckM Completeness | 96.9 % | ||
| CheckM Contamination | 0.59 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2687453658 annotated |
| GenBank Assembly Accession | GCA_900143035.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900143035.1 [NCBI] |
| BioSample | SAMN05421814 [NCBI] |
| BioProject | PRJEB18413 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2016-07-20T20:53:53.993 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | FRCU01 |
| NCBI TaxID | 1304 |
| Isolation Source | missing |
| Geo Location | missing |
