Genome Meta Information: Cellulosimicrobium funkei 3bp (GCA_900155925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900155925.1 | ||
| HOMD Taxon-ID | HMT-0374 | ||
| Species Name (in use by HOMD) | Cellulosimicrobium funkei | ||
| Organism Name (as deposited) | HMT-374 Cellulosimicrobium funkei 3bp | ||
| Strain or Isolate | 3bp | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulosimicrobium; s__Cellulosimicrobium funkei |
||
| Sequencing Technology | Illumina HiSeq 2500-1TB | ||
| Genome Coverage | 199 | ||
| Contigs |
|
||
| Total Sequence Length | 4,317,712 (bp) | ||
| GC Percentage | 74.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/155/925/GCA_900155925.1_IMG-taxon_2681812868_annotated_assembly | ||
| CDS | 3776 | ||
| Genes | 3866 | ||
| mRNA | 3866 | ||
| misc RNA | 26 | ||
| rRNA | 3 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 98.3 % | ||
| CheckM Contamination | 1.4 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | IMG-taxon 2681812868 annotated |
| GenBank Assembly Accession | GCA_900155925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900155925.1 [NCBI] |
| BioSample | SAMN05518682 [NCBI] |
| BioProject | PRJEB18885 [NCBI] |
| Submitter | DOE - JOINT GENOME INSTITUTE |
| Submission Date | 2016-08-06T01:21:39.536 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | FTMI01 |
| NCBI TaxID | 1612203 |
| Isolation Source | missing |
| Geo Location | missing |
