Genome Meta Information: Veillonella parvula NCTC11810 (GCA_900186885.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900186885.1 | ||
| HOMD Taxon-ID | HMT-0161 | ||
| Species Name (in use by HOMD) | Veillonella parvula | ||
| Organism Name (as deposited) | HMT-161 Veillonella parvula NCTC11810 | ||
| Strain or Isolate | NCTC11810 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella parvula |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 387 | ||
| Contigs |
|
||
| Total Sequence Length | 2,132,142 (bp) | ||
| GC Percentage | 38.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/186/885/GCA_900186885.1_48903_D01 | ||
| CDS | 1863 | ||
| Genes | 1944 | ||
| mRNA | 1944 | ||
| misc RNA | 20 | ||
| rRNA | 12 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.49 % | ||
| CheckM Contamination | 0.52 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 48903_D01 |
| GenBank Assembly Accession | GCA_900186885.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900186885.1 [NCBI] |
| BioSample | SAMEA4063028 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-11-03T11:15:59.570 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 29466 |
| Isolation Source | Intestinal tract |
| Geo Location | |
