Genome Meta Information: Fannyhessea vaginae NCTC13935 (GCA_900445305.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900445305.1 | ||
| HOMD Taxon-ID | HMT-0814 | ||
| Species Name (in use by HOMD) | Fannyhessea vaginae | ||
| Organism Name (as deposited) | HMT-814 Fannyhessea vaginae NCTC13935 | ||
| Strain or Isolate | NCTC13935 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Fannyhessea; s__Fannyhessea vaginae |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 1,451,822 (bp) | ||
| GC Percentage | 42.79 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/445/305/GCA_900445305.1_58174_B01 | ||
| CDS | 1164 | ||
| Genes | 1224 | ||
| mRNA | 1224 | ||
| misc RNA | 8 | ||
| rRNA | 6 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.02 % | ||
| CheckM Contamination | 0.12 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 58174_B01 |
| GenBank Assembly Accession | GCA_900445305.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900445305.1 [NCBI] |
| BioSample | SAMEA104307699 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2018-01-31T08:06:30.130 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UFSV01 |
| NCBI TaxID | 82135 |
| Isolation Source | Vagina |
| Geo Location | Sweden |
